Evolutionary History of Two Leatherback Turtle Lineages in the Eastern Pacific: Insights From Genomics, Morphometry and Local Ecological Knowledge

Carlos Abraham Castillo Morales


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10 Mar 2021

Evolution, History and Conservation of Two Species of Sea Turtle in the Coast of Oaxaca, Mexico

Through genetics, our research group discovered a new lineage of leatherback turtle (Dermochelys coriacea) in the Mexican Pacific. Using molecular clock analysis, we estimated the divergence time of this new lineage to be 13.5 million years, which is relatively large when compared to the divergence of other sea turtles for example the divergence of the sister species of the genus Lepidochelys 4.75 Mya, or the divergence between the sister species Chelonia mydas (green turtle) and Natator depressus (flatback turtle) 7.95.

Also, at the end of the 19th century, a debate arose within the scientific community regarding the existence of two species of leatherback turtles. The first to suggest this was Garman, who proposed that Pacific leatherbacks were distinct from those in other parts of the world and therefore decided to name them Sphargis schlegelii (at that time, leatherback turtles were classified under the genus Sphargis). However, he did not provide a formal description of this new species. Later, in 1899, a Chilean scientist named Philippi described a new species of leatherback turtle, which he named S. angusta. The description of this species included a narrower shell, less visible and yellowish spots, more pointed rear flippers, and a longer neck and tail. Until the mid-1900s, two species were formally recognized, although due to a lack of evidence, it is currently considered that there is only one species.

Leatherback turtle. ©Carlos Abraham Castillo Morales.

Leatherback turtle. ©Carlos Abraham Castillo Morales.

Additionally, through local ecological knowledge (LEK), we discovered that local inhabitants identify two varieties of leatherback turtles: one with white spots and a hump in its shell and the other without spots and slightly smaller and flippers proportionally smaller. Even in the state of Chiapas, the variants have their own names: “Parlama toro” and “Parlama tigre”. These three independent sources of information suggest the possible presence of two groups of leatherback turtles.

To resolve this uncertainty, a study involving genomics, geometric morphology, and LEK will be conducted to determine whether more than one group of leatherback turtles exists. Moreover, through genomics, we will be able to determine the level of selection in the population, whether there are genes adapted to local conditions, the effective population size, migration rates, and the level of inbreeding in the population. It has been suggested that the genetic differences found may be due to the presence of a NUMT (a copy of mtDNA in the nDNA), so we will also look for the presence of NUMTs in the population.

Header: Leatherback turtle and the moon. ©Carlos Abraham Castillo Morales.

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